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  <audit_log>
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      <undo_redo>
        <type>managed_results</type>
        <en_expanded>Managed results</en_expanded>
      </undo_redo>
      <summary>
        <type>managed_results</type>
        <en_expanded>Managed results</en_expanded>
      </summary>
      <hash>Nc6iUWyDC2RSa6hCluuCgX47TO8=</hash>
    </audit_log_entry>
    <audit_log_entry skyline_version="23.1.0.380-cf25ad847 (64-Bit)" time_stamp="2024-04-29T16:39:57-04:00" user="BRENDANX-LT5\brend">
      <extra_info>{0:ImportPeptideSearchSettings_ImportResultsSettings} = 
{
    {0:ImportResultsSettings_FoundResultsFiles} = 
    [
        "{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_01fmol.mzML}",
        "{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_100fmol.mzML}",
        "{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_10fmol.mzML}",
        "{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_1fmol.mzML}"
    ],
    {0:ImportResultsSettings_FileImportOption} = "{6:ImportResultsSimultaneousFileOptions_many}",
    {0:ImportResultsSettings_Prefix} = "02_DDA_"
},
{0:ImportPeptideSearchSettings_FullScanSettings} = 
{
    {0:TransitionFullScan_PrecursorIsotopes} = "{6:FullScanPrecursorIsotopes_Count}",
    {0:TransitionFullScan_PrecursorIsotopeFilter} = {3:3},
    {0:TransitionFullScan_PrecursorMassAnalyzer} = "{6:FullScanMassAnalyzerType_centroided}",
    {0:TransitionFullScan_MassAccuracy} = {3:10},
    {0:TransitionFullScan_IsotopeEnrichments} = "Default": 
{
        {0:IsotopeEnrichments_Enrichments} = 
        [
            {
                {0:IsotopeEnrichmentItem_IsotopeSymbol} = "H'",
                {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.98},
                {0:IsotopeEnrichmentItem_Symbol} = "H"
            },
            {
                {0:IsotopeEnrichmentItem_IsotopeSymbol} = "C'",
                {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.995},
                {0:IsotopeEnrichmentItem_Symbol} = "C"
            },
            {
                {0:IsotopeEnrichmentItem_IsotopeSymbol} = "N'",
                {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.995},
                {0:IsotopeEnrichmentItem_Symbol} = "N"
            },
            {
                {0:IsotopeEnrichmentItem_IsotopeSymbol} = "O"",
                {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.99},
                {0:IsotopeEnrichmentItem_Symbol} = "O"
            },
            {
                {0:IsotopeEnrichmentItem_IsotopeSymbol} = "O'",
                {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.99},
                {0:IsotopeEnrichmentItem_Symbol} = "O"
            }
        ]
    }
},
{0:ImportPeptideSearchSettings_ImportFastaSettings} = 
{
    {0:ImportFastaSettings_FastaFile} = "{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\02_PRM\PROCAL.fasta}"
},
{0:ImportPeptideSearchSettings_AssociateProteinsSettings} = 
{
    {0:ParsimonySettings_GroupProteins} = {3:False},
    {0:ParsimonySettings_FindMinimalProteinList} = {3:False},
    {0:ParsimonySettings_RemoveSubsetProteins} = {3:False},
    {0:ParsimonySettings_SharedPeptides} = "{6:SharedPeptides_DuplicatedBetweenProteins}",
    {0:ParsimonySettings_MinPeptidesPerProtein} = {3:1},
    {0:AssociateProteinsSettings_MappedProteins} = {3:1},
    {0:AssociateProteinsSettings_MappedPeptides} = {3:39},
    {0:AssociateProteinsSettings_TargetProteins} = {3:1},
    {0:AssociateProteinsSettings_TargetPeptides} = {3:39}
}</extra_info>
      <undo_redo>
        <type>imported_peptide_search</type>
        <en_expanded>Imported a peptide search</en_expanded>
      </undo_redo>
      <summary>
        <type>imported_peptide_search</type>
        <en_expanded>Imported a peptide search</en_expanded>
      </summary>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportResultsSettings}{2:PropertySeparator}{0:ImportResultsSettings_FoundResultsFiles}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_01fmol.mzML}"</name>
        <en_expanded>Import Peptide Search &gt; Extract Chromatograms &gt; Found results files : contains "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_01fmol.mzML"</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportResultsSettings}{2:PropertySeparator}{0:ImportResultsSettings_FoundResultsFiles}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_100fmol.mzML}"</name>
        <en_expanded>Import Peptide Search &gt; Extract Chromatograms &gt; Found results files : contains "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_100fmol.mzML"</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportResultsSettings}{2:PropertySeparator}{0:ImportResultsSettings_FoundResultsFiles}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_10fmol.mzML}"</name>
        <en_expanded>Import Peptide Search &gt; Extract Chromatograms &gt; Found results files : contains "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_10fmol.mzML"</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportResultsSettings}{2:PropertySeparator}{0:ImportResultsSettings_FoundResultsFiles}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_1fmol.mzML}"</name>
        <en_expanded>Import Peptide Search &gt; Extract Chromatograms &gt; Found results files : contains "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_1fmol.mzML"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportResultsSettings}{2:PropertySeparator}{0:ImportResultsSettings_FileImportOption}</name>
        <name>"{6:ImportResultsSimultaneousFileOptions_many}"</name>
        <en_expanded>Import Peptide Search &gt; Extract Chromatograms &gt; Files to import simultaneously is "Many"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportResultsSettings}{2:PropertySeparator}{0:ImportResultsSettings_Prefix}</name>
        <name>"02_DDA_"</name>
        <en_expanded>Import Peptide Search &gt; Extract Chromatograms &gt; Removed prefix is "02_DDA_"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_PrecursorIsotopes}</name>
        <name>"{6:FullScanPrecursorIsotopes_Count}"</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope peaks included is "Count"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_PrecursorIsotopeFilter}</name>
        <name>{3:3}</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Peaks is "3"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_PrecursorMassAnalyzer}</name>
        <name>"{6:FullScanMassAnalyzerType_centroided}"</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Precursor mass analyzer is "Centroided"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_MassAccuracy}</name>
        <name>{3:10}</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Mass accuracy is "10"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}</name>
        <name>"Default"</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope labeling enrichment is "Default"</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "H'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.98}, {0:IsotopeEnrichmentItem_Symbol} = "H" }</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "H'", Enrichment percentage = "0.98", Symbol = "H" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "C'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.995}, {0:IsotopeEnrichmentItem_Symbol} = "C" }</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "C'", Enrichment percentage = "0.995", Symbol = "C" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "N'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.995}, {0:IsotopeEnrichmentItem_Symbol} = "N" }</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "N'", Enrichment percentage = "0.995", Symbol = "N" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "O"", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.99}, {0:IsotopeEnrichmentItem_Symbol} = "O" }</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "O"", Enrichment percentage = "0.99", Symbol = "O" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_FullScanSettings}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "O'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.99}, {0:IsotopeEnrichmentItem_Symbol} = "O" }</name>
        <en_expanded>Import Peptide Search &gt; Configure Full-Scan Settings &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "O'", Enrichment percentage = "0.99", Symbol = "O" }</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_ImportFastaSettings}{2:PropertySeparator}{0:ImportFastaSettings_FastaFile}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\02_PRM\PROCAL.fasta}"</name>
        <en_expanded>Import Peptide Search &gt; Import FASTA &gt; FASTA file is "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\02_PRM\PROCAL.fasta"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:ParsimonySettings_GroupProteins}</name>
        <name>{3:False}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Group proteins is False</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:ParsimonySettings_FindMinimalProteinList}</name>
        <name>{3:False}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Find minimal protein list is False</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:ParsimonySettings_RemoveSubsetProteins}</name>
        <name>{3:False}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Remove subset proteins is False</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:ParsimonySettings_SharedPeptides}</name>
        <name>"{6:SharedPeptides_DuplicatedBetweenProteins}"</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Shared peptides option is "Duplicated between proteins"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:ParsimonySettings_MinPeptidesPerProtein}</name>
        <name>{3:1}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Min peptides per protein is "1"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:AssociateProteinsSettings_MappedProteins}</name>
        <name>{3:1}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Proteins mapped is "1"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:AssociateProteinsSettings_MappedPeptides}</name>
        <name>{3:39}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Peptides mapped is "39"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:AssociateProteinsSettings_TargetProteins}</name>
        <name>{3:1}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Protein targets is "1"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:ImportPeptideSearchSettings}{2:PropertySeparator}{0:ImportPeptideSearchSettings_AssociateProteinsSettings}{2:PropertySeparator}{0:AssociateProteinsSettings_TargetPeptides}</name>
        <name>{3:39}</name>
        <en_expanded>Import Peptide Search &gt; Associate Proteins &gt; Peptide targets is "39"</en_expanded>
      </all_info>
      <en_extra_info>Extract Chromatograms = 
{
    Found results files = 
    [
        "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_01fmol.mzML",
        "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_100fmol.mzML",
        "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_10fmol.mzML",
        "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\04_DDA\02_DDA_1fmol.mzML"
    ],
    Files to import simultaneously = "Many",
    Removed prefix = "02_DDA_"
},
Configure Full-Scan Settings = 
{
    Isotope peaks included = "Count",
    Peaks = "3",
    Precursor mass analyzer = "Centroided",
    Mass accuracy = "10",
    Isotope labeling enrichment = "Default": 
{
        Stable isotope labeling atoms = 
        [
            {
                Atom = "H'",
                Enrichment percentage = "0.98",
                Symbol = "H"
            },
            {
                Atom = "C'",
                Enrichment percentage = "0.995",
                Symbol = "C"
            },
            {
                Atom = "N'",
                Enrichment percentage = "0.995",
                Symbol = "N"
            },
            {
                Atom = "O"",
                Enrichment percentage = "0.99",
                Symbol = "O"
            },
            {
                Atom = "O'",
                Enrichment percentage = "0.99",
                Symbol = "O"
            }
        ]
    }
},
Import FASTA = 
{
    FASTA file = "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\02_PRM\PROCAL.fasta"
},
Associate Proteins = 
{
    Group proteins = False,
    Find minimal protein list = False,
    Remove subset proteins = False,
    Shared peptides option = "Duplicated between proteins",
    Min peptides per protein = "1",
    Proteins mapped = "1",
    Peptides mapped = "39",
    Protein targets = "1",
    Peptide targets = "39"
}</en_extra_info>
      <hash>Wb9jd1YMYP1lkM3K81RJS5Xf3AY=</hash>
    </audit_log_entry>
    <audit_log_entry skyline_version="23.1.0.380-cf25ad847 (64-Bit)" time_stamp="2024-04-29T16:38:40-04:00" user="BRENDANX-LT5\brend">
      <extra_info>{0:BuildPeptideSearchLibrarySettings_SearchFileNames} = 
[
    {
        {0:File_FileName} = "msms.txt",
        {0:File_ScoreTypeName} = "MaxQuant PEP",
        {0:File_ScoreThreshold} = {3:0.05}
    }
],
{0:BuildPeptideSearchLibrarySettings_Standard} = {2:None},
{0:BuildPeptideSearchLibrarySettings_IncludeAmbiguousMatches} = {3:False},
{0:BuildPeptideSearchLibrarySettings_FilterForDocumentPeptides} = {3:False},
{0:BuildPeptideSearchLibrarySettings_WorkFlow} = "{6:Workflow_dda}",
{0:BuildPeptideSearchLibrarySettings_InputFileType} = "{6:InputFile_search_result}"</extra_info>
      <undo_redo>
        <type>added_spectral_library</type>
        <name>Tutorial_DDA</name>
        <en_expanded>Added spectral library "Tutorial_DDA"</en_expanded>
      </undo_redo>
      <summary>
        <type>added_spectral_library</type>
        <name>Tutorial_DDA</name>
        <en_expanded>Added spectral library "Tutorial_DDA"</en_expanded>
      </summary>
      <all_info>
        <type>contains</type>
        <name>{0:BuildPeptideSearchLibrarySettings}{2:PropertySeparator}{0:BuildPeptideSearchLibrarySettings_SearchFileNames}</name>
        <name>{ {0:File_FileName} = "msms.txt", {0:File_ScoreTypeName} = "MaxQuant PEP", {0:File_ScoreThreshold} = {3:0.05} }</name>
        <en_expanded>Build Spectral Library &gt; Search files : contains { File = "msms.txt", Score type = "MaxQuant PEP", Score threshold = "0.05" }</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:BuildPeptideSearchLibrarySettings}{2:PropertySeparator}{0:BuildPeptideSearchLibrarySettings_Standard}</name>
        <name>{2:None}</name>
        <en_expanded>Build Spectral Library &gt; iRT standard peptides is None</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:BuildPeptideSearchLibrarySettings}{2:PropertySeparator}{0:BuildPeptideSearchLibrarySettings_IncludeAmbiguousMatches}</name>
        <name>{3:False}</name>
        <en_expanded>Build Spectral Library &gt; Include ambiguous matches is False</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:BuildPeptideSearchLibrarySettings}{2:PropertySeparator}{0:BuildPeptideSearchLibrarySettings_FilterForDocumentPeptides}</name>
        <name>{3:False}</name>
        <en_expanded>Build Spectral Library &gt; Filter for document peptides is False</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:BuildPeptideSearchLibrarySettings}{2:PropertySeparator}{0:BuildPeptideSearchLibrarySettings_WorkFlow}</name>
        <name>"{6:Workflow_dda}"</name>
        <en_expanded>Build Spectral Library &gt; Workflow is "DDA with MS1 filtering"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:BuildPeptideSearchLibrarySettings}{2:PropertySeparator}{0:BuildPeptideSearchLibrarySettings_InputFileType}</name>
        <name>"{6:InputFile_search_result}"</name>
        <en_expanded>Build Spectral Library &gt; Input File Type is "Search results (build library directly)"</en_expanded>
      </all_info>
      <en_extra_info>Search files = 
[
    {
        File = "msms.txt",
        Score type = "MaxQuant PEP",
        Score threshold = "0.05"
    }
],
iRT standard peptides = None,
Include ambiguous matches = False,
Filter for document peptides = False,
Workflow = "DDA with MS1 filtering",
Input File Type = "Search results (build library directly)"</en_extra_info>
      <hash>Q24t3EyZRekfuoJs/ID3tscmQHo=</hash>
    </audit_log_entry>
    <audit_log_entry skyline_version="23.1.0.380-cf25ad847 (64-Bit)" time_stamp="2024-04-29T16:37:44-04:00" user="BRENDANX-LT5\brend">
      <undo_redo>
        <type>changed</type>
        <name>{0:Settings}</name>
        <en_expanded>Settings changed</en_expanded>
      </undo_redo>
      <summary>
        <type>changed</type>
        <name>{0:Settings}</name>
        <en_expanded>Settings changed</en_expanded>
      </summary>
      <all_info>
        <type>removed_all</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_PeptideSettings}{2:TabSeparator}{0:PeptideSettings_Libraries}{2:PropertySeparator}{0:PeptideLibraries_LibrarySpecs}</name>
        <en_expanded>Settings &gt; Peptide Settings -- Library &gt; Libraries: removed all</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_PeptideIonTypesString}</name>
        <name>"p, y, b"</name>
        <name>"y"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Ion types changed from "p, y, b" to "y"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_SmallMoleculeIonTypesString}</name>
        <name>"f, p"</name>
        <name>"f"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Molecule Ion types changed from "f, p" to "f"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_StartFragmentFinderLabel}</name>
        <name>"{6:OrdinalFragmentFinder_ion_2}"</name>
        <name>"{6:MzFragmentFinder_m_z__gt__precursor}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Product ion selection start changed from "ion 2" to "m/z &gt; precursor"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_EndFragmentFinderLabel}</name>
        <name>"{6:LastFragmentFinder_last_ion}"</name>
        <name>"{6:DeltaFragmentFinder_3_ions}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Product ion selection end changed from "last ion" to "3 ions"</en_expanded>
      </all_info>
      <all_info>
        <type>added_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}</name>
        <name>"N-terminal to Proline"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions : "N-terminal to Proline" was added</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}{2:PropertySeparator}"N-terminal to Proline"{2:PropertySeparator}{0:MeasuredIon_Fragment}</name>
        <name>"P"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions &gt; "N-terminal to Proline" &gt; Fragment amino acids is "P"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}{2:PropertySeparator}"N-terminal to Proline"{2:PropertySeparator}{0:MeasuredIon_Restrict}</name>
        <name>{2:Missing}</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions &gt; "N-terminal to Proline" &gt; Unless next amino acids is Missing</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}{2:PropertySeparator}"N-terminal to Proline"{2:PropertySeparator}{0:MeasuredIon_Terminus}</name>
        <name>"{6:SequenceTerminus_N}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions &gt; "N-terminal to Proline" &gt; Type is "N"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}{2:PropertySeparator}"N-terminal to Proline"{2:PropertySeparator}{0:MeasuredIon_MinFragmentLength}</name>
        <name>{3:3}</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions &gt; "N-terminal to Proline" &gt; Min amino acids is "3"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}{2:PropertySeparator}"N-terminal to Proline"{2:PropertySeparator}{0:MeasuredIon_IsFragment}</name>
        <name>{3:True}</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions &gt; "N-terminal to Proline" &gt; Intense fragment is True</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}{2:PropertySeparator}"N-terminal to Proline"{2:PropertySeparator}{0:MeasuredIon_SettingsCustomIon}</name>
        <name>{2:Missing}</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions &gt; "N-terminal to Proline" &gt; Custom product ion is Missing</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Libraries}{2:PropertySeparator}{0:TransitionLibraries_MinIonCount}</name>
        <name>{3:6}</name>
        <name>{3:0}</name>
        <en_expanded>Settings &gt; Transition Settings -- Library &gt; Minimum product ions changed from "6" to "0"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Libraries}{2:PropertySeparator}{0:TransitionLibraries_IonCount}</name>
        <name>{3:6}</name>
        <name>{3:3}</name>
        <en_expanded>Settings &gt; Transition Settings -- Library &gt; Product ions changed from "6" to "3"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Integration}{2:PropertySeparator}{0:TransitionIntegration_IsIntegrateAll}</name>
        <name>{3:True}</name>
        <name>{3:False}</name>
        <en_expanded>Settings &gt; Transition Settings -- Integration &gt; Integrate All changed from True to False</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Instrument}{2:PropertySeparator}{0:TransitionInstrument_MinMz}</name>
        <name>{3:350}</name>
        <name>{3:50}</name>
        <en_expanded>Settings &gt; Transition Settings -- Instrument &gt; Min m/z changed from "350" to "50"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_AcquisitionMethod}</name>
        <name>"{6:FullScanAcquisitionMethod_PRM}"</name>
        <name>"{6:FullScanAcquisitionMethod_None}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Acquisition method changed from "PRM" to "None"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_ProductMassAnalyzer}</name>
        <name>"{6:FullScanMassAnalyzerType_centroided}"</name>
        <name>"{6:FullScanMassAnalyzerType_none}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Product mass analyzer changed from "Centroided" to "None"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_MassAccuracy}</name>
        <name>{3:10}</name>
        <name>{2:Missing}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Mass accuracy changed from "10" to Missing</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_PrecursorIsotopes}</name>
        <name>"{6:FullScanPrecursorIsotopes_Count}"</name>
        <name>"{6:FullScanPrecursorIsotopes_None}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope peaks included changed from "Count" to "None"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_PrecursorIsotopeFilter}</name>
        <name>{3:3}</name>
        <name>{2:Missing}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Peaks changed from "3" to Missing</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_PrecursorMassAnalyzer}</name>
        <name>"{6:FullScanMassAnalyzerType_centroided}"</name>
        <name>"{6:FullScanMassAnalyzerType_none}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Precursor mass analyzer changed from "Centroided" to "None"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_MassAccuracy}</name>
        <name>{3:10}</name>
        <name>{2:Missing}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Mass accuracy changed from "10" to Missing</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}</name>
        <name>"Default"</name>
        <name>{2:Missing}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment changed from "Default" to Missing</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_RetentionTimeFilterType}</name>
        <name>"{6:RetentionTimeFilterType_none}"</name>
        <name>"{6:RetentionTimeFilterType_ms2_ids}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Retention time filter type changed from "Include all matching scans" to "Use only scans within time frame of MS/MS IDs"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_RetentionTimeFilterLength}</name>
        <name>{3:0}</name>
        <name>{3:5}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Retention time filter length changed from "0" to "5"</en_expanded>
      </all_info>
      <hash>10+CbaBh/ADsIrcQnvgBmodaNvw=</hash>
    </audit_log_entry>
    <audit_log_entry skyline_version="23.1.0.380-cf25ad847 (64-Bit)" time_stamp="2024-04-29T16:37:43-04:00" user="BRENDANX-LT5\brend">
      <undo_redo>
        <type>start_log_existing_doc</type>
        <en_expanded>Start of audit log for already existing document</en_expanded>
      </undo_redo>
      <summary>
        <type>start_log_existing_doc</type>
        <en_expanded>Start of audit log for already existing document</en_expanded>
      </summary>
      <all_info>
        <type>added_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_PeptideSettings}{2:TabSeparator}{0:PeptideSettings_Libraries}{2:PropertySeparator}{0:PeptideLibraries_LibrarySpecs}</name>
        <name>"PROCAL"</name>
        <en_expanded>Settings &gt; Peptide Settings -- Library &gt; Libraries : "PROCAL" was added</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_PeptideSettings}{2:TabSeparator}{0:PeptideSettings_Libraries}{2:PropertySeparator}{0:PeptideLibraries_LibrarySpecs}{2:PropertySeparator}"PROCAL"{2:PropertySeparator}{0:LibrarySpec_FilePathAuditLog}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\02_PRM\PROCAL.blib}"</name>
        <en_expanded>Settings &gt; Peptide Settings -- Library &gt; Libraries &gt; "PROCAL" &gt; Path is "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\02_PRM\PROCAL.blib"</en_expanded>
      </all_info>
      <all_info>
        <type>added_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_PeptideSettings}{2:TabSeparator}{0:PeptideSettings_Libraries}{2:PropertySeparator}{0:PeptideLibraries_LibrarySpecs}</name>
        <name>"PROCAL-Prosit"</name>
        <en_expanded>Settings &gt; Peptide Settings -- Library &gt; Libraries : "PROCAL-Prosit" was added</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_PeptideSettings}{2:TabSeparator}{0:PeptideSettings_Libraries}{2:PropertySeparator}{0:PeptideLibraries_LibrarySpecs}{2:PropertySeparator}"PROCAL-Prosit"{2:PropertySeparator}{0:LibrarySpec_FilePathAuditLog}</name>
        <name>"{4:C:\Users\brend\Documents\2024-NEU-S1\Tutorial\05_backup\PROCAL-Prosit.blib}"</name>
        <en_expanded>Settings &gt; Peptide Settings -- Library &gt; Libraries &gt; "PROCAL-Prosit" &gt; Path is "C:\Users\brend\Documents\2024-NEU-S1\Tutorial\05_backup\PROCAL-Prosit.blib"</en_expanded>
      </all_info>
      <all_info>
        <type>is_</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_PeptideSettings}{2:TabSeparator}{0:PeptideSettings_Libraries}{2:PropertySeparator}{0:PeptideLibraries_LibrarySpecs}{2:PropertySeparator}"PROCAL-Prosit"{2:PropertySeparator}{0:LibrarySpec_UseExplicitPeakBounds}</name>
        <name>{3:False}</name>
        <en_expanded>Settings &gt; Peptide Settings -- Library &gt; Libraries &gt; "PROCAL-Prosit" &gt; Use explicit peak bounds is False</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_PeptideIonTypesString}</name>
        <name>"y"</name>
        <name>"p, y, b"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Ion types changed from "y" to "p, y, b"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_SmallMoleculeIonTypesString}</name>
        <name>"f"</name>
        <name>"f, p"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Molecule Ion types changed from "f" to "f, p"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_StartFragmentFinderLabel}</name>
        <name>"{6:MzFragmentFinder_m_z__gt__precursor}"</name>
        <name>"{6:OrdinalFragmentFinder_ion_2}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Product ion selection start changed from "m/z &gt; precursor" to "ion 2"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_EndFragmentFinderLabel}</name>
        <name>"{6:DeltaFragmentFinder_3_ions}"</name>
        <name>"{6:LastFragmentFinder_last_ion}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Product ion selection end changed from "3 ions" to "last ion"</en_expanded>
      </all_info>
      <all_info>
        <type>removed_all</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Filter}{2:PropertySeparator}{0:TransitionFilter_MeasuredIons}</name>
        <en_expanded>Settings &gt; Transition Settings -- Filter &gt; Special ions: removed all</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Libraries}{2:PropertySeparator}{0:TransitionLibraries_MinIonCount}</name>
        <name>{3:0}</name>
        <name>{3:6}</name>
        <en_expanded>Settings &gt; Transition Settings -- Library &gt; Minimum product ions changed from "0" to "6"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Libraries}{2:PropertySeparator}{0:TransitionLibraries_IonCount}</name>
        <name>{3:3}</name>
        <name>{3:6}</name>
        <en_expanded>Settings &gt; Transition Settings -- Library &gt; Product ions changed from "3" to "6"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Integration}{2:PropertySeparator}{0:TransitionIntegration_IsIntegrateAll}</name>
        <name>{3:False}</name>
        <name>{3:True}</name>
        <en_expanded>Settings &gt; Transition Settings -- Integration &gt; Integrate All changed from False to True</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_Instrument}{2:PropertySeparator}{0:TransitionInstrument_MinMz}</name>
        <name>{3:50}</name>
        <name>{3:350}</name>
        <en_expanded>Settings &gt; Transition Settings -- Instrument &gt; Min m/z changed from "50" to "350"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_AcquisitionMethod}</name>
        <name>"{6:FullScanAcquisitionMethod_None}"</name>
        <name>"{6:FullScanAcquisitionMethod_PRM}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Acquisition method changed from "None" to "PRM"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_ProductMassAnalyzer}</name>
        <name>"{6:FullScanMassAnalyzerType_none}"</name>
        <name>"{6:FullScanMassAnalyzerType_centroided}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Product mass analyzer changed from "None" to "Centroided"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_MassAccuracy}</name>
        <name>{2:Missing}</name>
        <name>{3:10}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Mass accuracy changed from Missing to "10"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_PrecursorIsotopes}</name>
        <name>"{6:FullScanPrecursorIsotopes_None}"</name>
        <name>"{6:FullScanPrecursorIsotopes_Count}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope peaks included changed from "None" to "Count"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_PrecursorIsotopeFilter}</name>
        <name>{2:Missing}</name>
        <name>{3:3}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Peaks changed from Missing to "3"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_PrecursorMassAnalyzer}</name>
        <name>"{6:FullScanMassAnalyzerType_none}"</name>
        <name>"{6:FullScanMassAnalyzerType_centroided}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Precursor mass analyzer changed from "None" to "Centroided"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_MassAccuracy}</name>
        <name>{2:Missing}</name>
        <name>{3:10}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Mass accuracy changed from Missing to "10"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}</name>
        <name>{2:Missing}</name>
        <name>"Default"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment changed from Missing to "Default"</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "H'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.98}, {0:IsotopeEnrichmentItem_Symbol} = "H" }</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "H'", Enrichment percentage = "0.98", Symbol = "H" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "C'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.995}, {0:IsotopeEnrichmentItem_Symbol} = "C" }</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "C'", Enrichment percentage = "0.995", Symbol = "C" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "N'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.995}, {0:IsotopeEnrichmentItem_Symbol} = "N" }</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "N'", Enrichment percentage = "0.995", Symbol = "N" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "O"", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.99}, {0:IsotopeEnrichmentItem_Symbol} = "O" }</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "O"", Enrichment percentage = "0.99", Symbol = "O" }</en_expanded>
      </all_info>
      <all_info>
        <type>contains</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_IsotopeEnrichments}{2:PropertySeparator}{0:IsotopeEnrichments_Enrichments}</name>
        <name>{ {0:IsotopeEnrichmentItem_IsotopeSymbol} = "O'", {0:IsotopeEnrichmentItem_AtomPercentEnrichment} = {3:0.99}, {0:IsotopeEnrichmentItem_Symbol} = "O" }</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Isotope labeling enrichment &gt; Stable isotope labeling atoms : contains { Atom = "O'", Enrichment percentage = "0.99", Symbol = "O" }</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_RetentionTimeFilterType}</name>
        <name>"{6:RetentionTimeFilterType_ms2_ids}"</name>
        <name>"{6:RetentionTimeFilterType_none}"</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Retention time filter type changed from "Use only scans within time frame of MS/MS IDs" to "Include all matching scans"</en_expanded>
      </all_info>
      <all_info>
        <type>changed_from_to</type>
        <name>{0:Settings}{2:PropertySeparator}{0:SrmSettings_TransitionSettings}{2:TabSeparator}{0:TransitionSettings_FullScan}{2:PropertySeparator}{0:TransitionFullScan_RetentionTimeFilterLength}</name>
        <name>{3:5}</name>
        <name>{3:0}</name>
        <en_expanded>Settings &gt; Transition Settings -- Full-Scan &gt; Retention time filter length changed from "5" to "0"</en_expanded>
      </all_info>
      <hash>DY/g6dpLuD7qBUfVxPYUr4RRqak=</hash>
    </audit_log_entry>
  </audit_log>
</audit_log_root>